checkQC.run_type_summarizer module¶
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class
checkQC.run_type_summarizer.
RunTypeSummarizer
[source]¶ Bases:
object
RunTypeSummarizer contains methods used to summarize information about a run (mostly in order to be able to report this back to the user in one for or another).
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static
summarize
(instrument_and_reagent_version, read_lengths, handler_config)[source]¶ Utility method to parse log and summarize the information about a particular run. This is used to tell the user what information CheckQC has gathered about a run, and what configuration was used.
Parameters: - instrument_and_reagent_version – str with instrument and reagent version
- read_lengths – str with read length
- handler_config – dict with handler configuration
Returns: dict with information on the handlers used
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static