checkQC.parsers.interop_parser module¶
-
class
checkQC.parsers.interop_parser.
InteropParser
(runfolder, parser_configurations, *args, **kwargs)[source]¶ Bases:
checkQC.parsers.parser.Parser
This Parser will get data from the Illumina Interop binary files, and send it to its subscribers as a tuple with the first element being the name of the element and the second one being a the actual data.
At this point the following data which is fetched from the Interop files and is sent in the following format:
- (“error_rate”, {“lane”: <lane nbr>, “read”: <read nbr>, “error_rate”: <error rate>}))
- (“percent_q30”, {“lane”: <lane nbr>, “read”: <read nbr>, “percent_q30”: <percent q30>}))